Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01852 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01852 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01852 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.52□□□□□ -0.73
P01852 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.52□□□□□ -0.73
P01852 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01852 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.52□□□□□ -0.73
P01852 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.52□□□□□ -0.73
P01852 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P01852 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.51□□□□□ -0.73
P01852 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.51□□□□□ -0.73
P01852 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P01852 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P01852 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.51□□□□□ -0.73
P01852 Gm22920-201ENSMUST00000102175 109 ntBASIC10.51□□□□□ -0.73
P01852 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P01852 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.51□□□□□ -0.73
P01852 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.51□□□□□ -0.73
P01852 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
P01852 Gm9211-201ENSMUST00000182882 975 ntBASIC10.51□□□□□ -0.73
P01852 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.51□□□□□ -0.73
P01852 Gm44506-201ENSMUST00000206278 965 ntBASIC10.51□□□□□ -0.73
P01852 Gm18065-201ENSMUST00000221395 526 ntBASIC10.51□□□□□ -0.73
P01852 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.51□□□□□ -0.73
P01852 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P01852 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P01852 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P01852 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01852 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.51□□□□□ -0.73
P01852 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
P01852 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P01852 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P01852 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.5□□□□□ -0.73
P01852 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.5□□□□□ -0.73
P01852 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.5□□□□□ -0.73
P01852 Gm22144-201ENSMUST00000157402 102 ntBASIC10.5□□□□□ -0.73
P01852 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P01852 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.5□□□□□ -0.73
P01852 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.5□□□□□ -0.73
P01852 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P01852 Gm4978-201ENSMUST00000071565 801 ntBASIC10.5□□□□□ -0.73
P01852 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
P01852 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.5□□□□□ -0.73
P01852 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.5□□□□□ -0.73
P01852 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.5□□□□□ -0.73
P01852 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.5□□□□□ -0.73
P01852 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P01852 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.5□□□□□ -0.73
P01852 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P01852 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.5□□□□□ -0.73
P01852 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.5□□□□□ -0.73
P01852 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P01852 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01852 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.49□□□□□ -0.73
P01852 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms