Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.79□□□□□ -0.52
CopeO89079 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CopeO89079 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CopeO89079 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CopeO89079 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.78□□□□□ -0.52
CopeO89079 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CopeO89079 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.78□□□□□ -0.52
CopeO89079 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Gm44008-201ENSMUST00000204345 412 ntBASIC11.78□□□□□ -0.52
CopeO89079 Gm21769-201ENSMUST00000211922 111 ntBASIC11.78□□□□□ -0.52
CopeO89079 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CopeO89079 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopeO89079 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.77□□□□□ -0.52
CopeO89079 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CopeO89079 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CopeO89079 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CopeO89079 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.77□□□□□ -0.52
CopeO89079 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
CopeO89079 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CopeO89079 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CopeO89079 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CopeO89079 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.77□□□□□ -0.53
CopeO89079 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.77□□□□□ -0.53
CopeO89079 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CopeO89079 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
CopeO89079 Gm8343-201ENSMUST00000182705 994 ntBASIC11.77□□□□□ -0.53
CopeO89079 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.77□□□□□ -0.53
CopeO89079 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Gm9797-202ENSMUST00000218003 294 ntBASIC11.77□□□□□ -0.53
CopeO89079 Gm9368-201ENSMUST00000219348 831 ntBASIC11.77□□□□□ -0.53
CopeO89079 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CopeO89079 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.77□□□□□ -0.53
CopeO89079 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.77□□□□□ -0.53
CopeO89079 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CopeO89079 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.77□□□□□ -0.53
CopeO89079 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.77□□□□□ -0.53
CopeO89079 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CopeO89079 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms