Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Gm25554-201ENSMUST00000158075 113 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.39□□□□□ -0.11
Vamp4O70480 Gm30671-201ENSMUST00000214898 318 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.39□□□□□ -0.11
Vamp4O70480 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vamp4O70480 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.39□□□□□ -0.11
Vamp4O70480 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.39□□□□□ -0.11
Vamp4O70480 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Vamp4O70480 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp4O70480 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vamp4O70480 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vamp4O70480 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vamp4O70480 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.38□□□□□ -0.11
Vamp4O70480 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.38□□□□□ -0.11
Vamp4O70480 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vamp4O70480 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Vamp4O70480 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.38□□□□□ -0.11
Vamp4O70480 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 Gm8365-201ENSMUST00000197334 648 ntBASIC14.38□□□□□ -0.11
Vamp4O70480 Gm44323-201ENSMUST00000198689 129 ntBASIC14.38□□□□□ -0.11
Vamp4O70480 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vamp4O70480 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.38□□□□□ -0.11
Vamp4O70480 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Vamp4O70480 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp4O70480 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp4O70480 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vamp4O70480 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vamp4O70480 Gm12463-201ENSMUST00000118271 849 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Gm11451-201ENSMUST00000118946 630 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vamp4O70480 Gm13888-201ENSMUST00000119148 422 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.37□□□□□ -0.11
Vamp4O70480 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vamp4O70480 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.37□□□□□ -0.11
Vamp4O70480 Gm6439-201ENSMUST00000199849 862 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Gm5599-201ENSMUST00000209602 788 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Gm29787-201ENSMUST00000222129 849 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.37□□□□□ -0.11
Vamp4O70480 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vamp4O70480 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Vamp4O70480 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp4O70480 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vamp4O70480 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms