Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.37□□□□□ -0.59
Pdlim1O70400 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.37□□□□□ -0.59
Pdlim1O70400 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.37□□□□□ -0.59
Pdlim1O70400 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm15881-201ENSMUST00000148792 942 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm9211-201ENSMUST00000182882 975 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm5996-201ENSMUST00000211110 718 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm45856-201ENSMUST00000212752 416 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.37□□□□□ -0.59
Pdlim1O70400 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pdlim1O70400 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm15615-201ENSMUST00000118876 198 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm16219-201ENSMUST00000120096 274 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm15549-201ENSMUST00000121595 622 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pdlim1O70400 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm43186-201ENSMUST00000198130 824 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm44100-201ENSMUST00000204329 436 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.36□□□□□ -0.59
Pdlim1O70400 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm10254-201ENSMUST00000052888 867 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm5451-201ENSMUST00000080545 579 ntBASIC11.36□□□□□ -0.59
Pdlim1O70400 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Pdlim1O70400 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms