Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm15617-201ENSMUST00000118973 771 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm12943-201ENSMUST00000119616 210 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm13019-201ENSMUST00000120000 276 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm18035-201ENSMUST00000211962 589 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.61□□□□□ -0.39
Trdmt1O55055 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.61□□□□□ -0.39
Trdmt1O55055 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdmt1O55055 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm11996-201ENSMUST00000117538 915 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm17221-201ENSMUST00000163909 481 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm17073-201ENSMUST00000168069 556 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Mir7035-201ENSMUST00000184713 82 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm18801-201ENSMUST00000186616 536 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm42433-201ENSMUST00000196806 940 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm42660-201ENSMUST00000197733 947 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.6□□□□□ -0.39
Trdmt1O55055 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.6□□□□□ -0.39
Trdmt1O55055 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdmt1O55055 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.59□□□□□ -0.39
Trdmt1O55055 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdmt1O55055 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.59□□□□□ -0.39
Trdmt1O55055 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms