Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.96□□□□□ -0.5
Ebf3O08791 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.95□□□□□ -0.5
Ebf3O08791 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.95□□□□□ -0.5
Ebf3O08791 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Ebf3O08791 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.95□□□□□ -0.5
Ebf3O08791 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.95□□□□□ -0.5
Ebf3O08791 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.95□□□□□ -0.5
Ebf3O08791 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Olfr584-201ENSMUST00000098210 964 ntBASIC11.95□□□□□ -0.5
Ebf3O08791 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ebf3O08791 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf3O08791 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf3O08791 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.94□□□□□ -0.5
Ebf3O08791 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.94□□□□□ -0.5
Ebf3O08791 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.94□□□□□ -0.5
Ebf3O08791 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.94□□□□□ -0.5
Ebf3O08791 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.94□□□□□ -0.5
Ebf3O08791 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf3O08791 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf3O08791 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Ebf3O08791 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms