Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm12015-201ENSMUST00000117065 843 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm14071-201ENSMUST00000117817 509 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm5070-201ENSMUST00000177599 862 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm28937-201ENSMUST00000185413 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm29400-201ENSMUST00000187208 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm28662-201ENSMUST00000188446 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm28251-201ENSMUST00000188835 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm38002-201ENSMUST00000193255 180 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm37318-201ENSMUST00000194325 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm38017-201ENSMUST00000194768 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm37287-201ENSMUST00000195449 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm37793-201ENSMUST00000195548 695 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm43966-201ENSMUST00000203301 612 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm18065-201ENSMUST00000221395 526 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shisa8J3QNX5 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.4□□□□□ -0.74
Shisa8J3QNX5 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.4□□□□□ -0.74
Shisa8J3QNX5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Gzmn-202ENSMUST00000225535 989 ntBASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Shisa8J3QNX5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms