Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm23595-201ENSMUST00000104306 130 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm13171-201ENSMUST00000117233 391 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm15197-201ENSMUST00000120526 478 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm4868-201ENSMUST00000164138 789 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm6606-201ENSMUST00000193613 947 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm8255-201ENSMUST00000218693 305 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm4978-201ENSMUST00000071565 801 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm6564-201ENSMUST00000075377 619 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.83□□□□□ -0.19
NpcdF8VQB8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm5395-201ENSMUST00000121650 915 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm11993-201ENSMUST00000121861 820 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm25492-201ENSMUST00000157383 129 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm24078-201ENSMUST00000158184 103 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm9372-201ENSMUST00000168454 430 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Mir8093-201ENSMUST00000185043 137 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.83□□□□□ -0.2
NpcdF8VQB8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NpcdF8VQB8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm12418-201ENSMUST00000118116 942 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm14497-201ENSMUST00000119537 580 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms