Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.73□□□□□ -0.21
Ube4aE9Q735 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ube4aE9Q735 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.73□□□□□ -0.21
Ube4aE9Q735 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.73□□□□□ -0.21
Ube4aE9Q735 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4aE9Q735 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm6158-201ENSMUST00000109467 904 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.72□□□□□ -0.21
Ube4aE9Q735 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4aE9Q735 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm14165-201ENSMUST00000121456 952 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm3828-201ENSMUST00000121817 257 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm4862-201ENSMUST00000170405 438 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm17889-201ENSMUST00000198410 598 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm44647-201ENSMUST00000207402 428 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.71□□□□□ -0.21
Ube4aE9Q735 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4aE9Q735 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4aE9Q735 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms