Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Gm37160-201ENSMUST00000193081 1689 ntBASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.88■□□□□ 0.13
Hfm1D3Z4R1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm12009-201ENSMUST00000121361 1100 ntBASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm43726-201ENSMUST00000199110 775 ntBASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm6794-201ENSMUST00000203829 457 ntBASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hfm1D3Z4R1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Mir1893-201ENSMUST00000122565 83 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gm17936-201ENSMUST00000199413 988 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 AC116797.2-202ENSMUST00000223587 1017 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 CT030035.1-201ENSMUST00000223964 935 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 AC103672.1-201ENSMUST00000227502 365 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gm8873-201ENSMUST00000217847 1439 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 AC090962.2-201ENSMUST00000225064 1801 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gm42815-201ENSMUST00000198787 1470 ntBASIC15.86■□□□□ 0.13
Hfm1D3Z4R1 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm4775-201ENSMUST00000169588 402 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm27444-201ENSMUST00000184157 137 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 AC140314.1-201ENSMUST00000219549 554 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 CT010505.2-201ENSMUST00000227918 998 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm42858-201ENSMUST00000202512 1704 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 168.5 ms