Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col4a6B1AVK5 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.59□□□□□ -0.55
Col4a6B1AVK5 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.59□□□□□ -0.55
Col4a6B1AVK5 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.59□□□□□ -0.55
Col4a6B1AVK5 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.59□□□□□ -0.55
Col4a6B1AVK5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.59□□□□□ -0.55
Col4a6B1AVK5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col4a6B1AVK5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col4a6B1AVK5 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.59□□□□□ -0.55
Col4a6B1AVK5 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col4a6B1AVK5 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col4a6B1AVK5 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col4a6B1AVK5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gm12028-201ENSMUST00000118065 436 ntBASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.58□□□□□ -0.56
Col4a6B1AVK5 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Gm33707-201ENSMUST00000195135 569 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Gm8643-201ENSMUST00000195228 625 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 CT010505.2-201ENSMUST00000227918 998 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col4a6B1AVK5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms