Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm9129-201ENSMUST00000218173 1689 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm11439-201ENSMUST00000118598 409 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm8100-201ENSMUST00000182906 988 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm5852-201ENSMUST00000194119 1021 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm38151-201ENSMUST00000195085 289 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm5714-201ENSMUST00000197343 566 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm2965-201ENSMUST00000198365 343 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 CT025694.1-201ENSMUST00000226188 934 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm21811-201ENSMUST00000096485 930 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm13910-201ENSMUST00000121752 1428 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm37105-201ENSMUST00000192251 2085 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm14028-201ENSMUST00000117434 479 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm14724-201ENSMUST00000118400 537 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm12266-201ENSMUST00000120311 962 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm24990-201ENSMUST00000157406 323 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC8.3□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm17040-202ENSMUST00000170597 889 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms