Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm8815-201ENSMUST00000173809 620 ntBASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm10288-201ENSMUST00000084614 537 ntBASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
ClcnkaQ9WUB7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm23200-201ENSMUST00000104379 132 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm15515-201ENSMUST00000117827 822 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm7857-201ENSMUST00000117957 358 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms