Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm21811-201ENSMUST00000096485 930 ntBASIC10.25□□□□□ -0.77
Nubp2Q9R061 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.25□□□□□ -0.77
Nubp2Q9R061 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.25□□□□□ -0.77
Nubp2Q9R061 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nubp2Q9R061 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm26286-201ENSMUST00000104166 134 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm23596-201ENSMUST00000104304 132 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm11331-201ENSMUST00000119764 288 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm15610-201ENSMUST00000120584 195 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm25881-201ENSMUST00000157783 103 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm807-202ENSMUST00000224929 408 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gm8420-201ENSMUST00000097103 598 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.24□□□□□ -0.77
Nubp2Q9R061 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nubp2Q9R061 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm9062-201ENSMUST00000117712 727 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm12501-201ENSMUST00000119163 529 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 Gm12196-201ENSMUST00000120954 262 ntBASIC10.23□□□□□ -0.77
Nubp2Q9R061 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nubp2Q9R061 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms