Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trem1Q9JKE2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm43615-201ENSMUST00000197465 1773 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm27243-201ENSMUST00000183964 521 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm4034-201ENSMUST00000187674 480 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm24136-201ENSMUST00000083374 165 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trem1Q9JKE2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm12203-201ENSMUST00000118235 598 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm11803-201ENSMUST00000119966 444 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm12209-201ENSMUST00000120089 596 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm11637-201ENSMUST00000120601 592 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm14057-201ENSMUST00000120631 482 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm11597-201ENSMUST00000121423 964 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm2423-201ENSMUST00000074863 733 ntBASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms