Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.12□□□□□ -0.95
Smco4Q9JIS3 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm23912-201ENSMUST00000104687 87 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm12463-201ENSMUST00000118271 849 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm5706-201ENSMUST00000181525 993 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm6007-201ENSMUST00000208170 823 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 AC154176.2-201ENSMUST00000225376 6429 ntBASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco4Q9JIS3 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms