Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm11941-201ENSMUST00000119904 610 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm22334-201ENSMUST00000158070 133 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm8343-201ENSMUST00000182705 994 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm6439-201ENSMUST00000199849 862 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm1821-202ENSMUST00000227415 750 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12616-201ENSMUST00000118594 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm15432-201ENSMUST00000121106 195 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12624-201ENSMUST00000177615 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12621-201ENSMUST00000177760 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12615-201ENSMUST00000177970 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12622-201ENSMUST00000177975 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12627-201ENSMUST00000178412 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12625-201ENSMUST00000179122 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12614-201ENSMUST00000179586 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm12613-201ENSMUST00000180323 382 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm19353-201ENSMUST00000184561 445 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm4482-201ENSMUST00000200876 742 ntBASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tubb3Q9ERD7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.4□□□□□ -0.58
Tubb3Q9ERD7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms