Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.79□□□□□ -0.52
Nkx2-4Q9EQM3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-4Q9EQM3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-4Q9EQM3 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.79□□□□□ -0.52
Nkx2-4Q9EQM3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-4Q9EQM3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-4Q9EQM3 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Snord23-201ENSMUST00000116828 109 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm14071-201ENSMUST00000117817 509 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm7765-201ENSMUST00000182585 974 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm27440-201ENSMUST00000184785 107 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm29304-201ENSMUST00000186555 695 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm29223-201ENSMUST00000188867 695 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm37921-201ENSMUST00000194333 695 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm30946-201ENSMUST00000198288 724 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-4Q9EQM3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nkx2-4Q9EQM3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Gm5178-201ENSMUST00000219380 898 ntBASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-4Q9EQM3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms