Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm13916-201ENSMUST00000117368 628 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm14028-201ENSMUST00000117434 479 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm12501-201ENSMUST00000119163 529 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm10807-201ENSMUST00000177134 795 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm37246-201ENSMUST00000192665 835 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpne8Q9DC53 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm14277-201ENSMUST00000121195 360 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm17040-202ENSMUST00000170597 889 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm9353-201ENSMUST00000200472 604 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpne8Q9DC53 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms