Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.71□□□□□ -0.7
Cdc40Q9DC48 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gm15566-201ENSMUST00000121130 590 ntBASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gm17391-201ENSMUST00000171036 126 ntBASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdc40Q9DC48 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gm4726-201ENSMUST00000135604 736 ntBASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gm6019-201ENSMUST00000148369 736 ntBASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.69□□□□□ -0.7
Cdc40Q9DC48 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdc40Q9DC48 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 261.7 ms