Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Gm12857-201ENSMUST00000117678 592 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Gm11439-201ENSMUST00000118598 409 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Gm15207-201ENSMUST00000119259 442 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Gm7940-201ENSMUST00000218195 769 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Gm807-202ENSMUST00000224929 408 ntBASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gtf3c6Q9D8P7 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Gm16505-201ENSMUST00000179981 232 ntBASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Gm7003-201ENSMUST00000195089 312 ntBASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf3c6Q9D8P7 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Gtf3c6Q9D8P7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm14724-201ENSMUST00000118400 537 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm15711-201ENSMUST00000118889 535 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm26047-201ENSMUST00000157308 113 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Gm26047-202ENSMUST00000198840 115 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.45□□□□□ -0.42
Gtf3c6Q9D8P7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms