Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.72□□□□□ -0.21
Chmp4cQ9D7F7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm13996-201ENSMUST00000118456 430 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Gm43937-201ENSMUST00000204640 3122 ntBASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp4cQ9D7F7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4cQ9D7F7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm14208-201ENSMUST00000119645 678 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm13665-201ENSMUST00000120830 528 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm11660-201ENSMUST00000120955 412 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm38117-201ENSMUST00000194653 939 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4cQ9D7F7 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.69□□□□□ -0.22
Chmp4cQ9D7F7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms