Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm15595-201ENSMUST00000120840 961 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm9540-201ENSMUST00000188230 478 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ddx56Q9D0R4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ddx56Q9D0R4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Ddx56Q9D0R4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ddx56Q9D0R4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.08□□□□□ -0.47
Ddx56Q9D0R4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ddx56Q9D0R4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.08□□□□□ -0.48
Ddx56Q9D0R4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm25732-201ENSMUST00000175168 60 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms