Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gm4310-201ENSMUST00000177847 889 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gm7940-201ENSMUST00000218195 769 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.81□□□□□ -0.52
Snf8Q9CZ28 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm22133-201ENSMUST00000102082 109 ntBASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Cts7-204ENSMUST00000225321 1257 ntBASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.8□□□□□ -0.52
Snf8Q9CZ28 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snf8Q9CZ28 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snf8Q9CZ28 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snf8Q9CZ28 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snf8Q9CZ28 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snf8Q9CZ28 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 612.2 ms