Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim13Q9CYB0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Erich3-203ENSMUST00000189969 3460 ntBASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm28745-201ENSMUST00000190069 305 ntBASIC10.62□□□□□ -0.71
Trim13Q9CYB0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm5950-201ENSMUST00000213337 772 ntBASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim13Q9CYB0 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm4986-201ENSMUST00000119731 549 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm43438-201ENSMUST00000198133 379 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm18054-201ENSMUST00000207539 555 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms