Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrrc40Q9CRC8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.4□□□□□ -0.59
Lrrc40Q9CRC8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm14208-201ENSMUST00000119645 678 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm29499-201ENSMUST00000189151 486 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm28329-201ENSMUST00000191208 689 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm29171-201ENSMUST00000191397 486 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrrc40Q9CRC8 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Gm13461-201ENSMUST00000120980 662 ntBASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Gm8199-201ENSMUST00000121323 823 ntBASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Lrrc40Q9CRC8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms