Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm8956-201ENSMUST00000203939 825 ntBASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Rgr-203ENSMUST00000225070 4704 ntBASIC11.26□□□□□ -0.61
Trim8Q99PJ2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Gm3096-201ENSMUST00000185770 364 ntBASIC11.25□□□□□ -0.61
Trim8Q99PJ2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms