Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm28302-201ENSMUST00000187931 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28646-201ENSMUST00000188220 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28205-201ENSMUST00000189177 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm29032-201ENSMUST00000189797 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28695-201ENSMUST00000190300 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm37448-201ENSMUST00000192795 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm26047-202ENSMUST00000198840 115 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm26448-201ENSMUST00000082446 203 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Btrc-209ENSMUST00000224478 2194 ntBASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdk5rap3Q99LM2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms