Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cstf3Q99LI7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 BC043934-202ENSMUST00000185694 2356 ntBASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm14071-201ENSMUST00000117817 509 ntBASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm8566-201ENSMUST00000120174 465 ntBASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm26083-201ENSMUST00000157904 193 ntBASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm5714-201ENSMUST00000197343 566 ntBASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.1□□□□□ -0.63
Cstf3Q99LI7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm45113-201ENSMUST00000207518 165 ntBASIC11.09□□□□□ -0.63
Cstf3Q99LI7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms