Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Gm10179-201ENSMUST00000086233 688 ntBASIC11.08□□□□□ -0.64
Rab28Q99KL7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rab28Q99KL7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.08□□□□□ -0.64
Rab28Q99KL7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rab28Q99KL7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm15131-201ENSMUST00000119124 595 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm15374-201ENSMUST00000119313 844 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm16219-201ENSMUST00000120096 274 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Olfml3-204ENSMUST00000169286 874 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm5523-201ENSMUST00000180415 997 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Erich3-203ENSMUST00000189969 3460 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.07□□□□□ -0.64
Rab28Q99KL7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rab28Q99KL7 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm19459-201ENSMUST00000176240 835 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm23771-201ENSMUST00000178702 110 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm37284-201ENSMUST00000193607 539 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.06□□□□□ -0.64
Rab28Q99KL7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rab28Q99KL7 Gm3786-201ENSMUST00000202659 378 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms