Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm23596-201ENSMUST00000104304 132 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm23200-201ENSMUST00000104379 132 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm4909-201ENSMUST00000118749 794 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm12217-201ENSMUST00000118858 696 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm11660-201ENSMUST00000120955 412 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Usp11Q99K46 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.1□□□□□ -0.47
Usp11Q99K46 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp11Q99K46 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm11509-201ENSMUST00000117358 325 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Mir6927-201ENSMUST00000184494 71 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm3332-201ENSMUST00000189337 928 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm9136-201ENSMUST00000193368 454 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm37466-201ENSMUST00000195692 652 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm19287-201ENSMUST00000203190 358 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.09□□□□□ -0.47
Usp11Q99K46 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp11Q99K46 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms