Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.57□□□□□ -0.56
Cdk9Q99J95 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm10434-201ENSMUST00000101158 471 ntBASIC11.56□□□□□ -0.56
Cdk9Q99J95 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm12164-201ENSMUST00000121695 551 ntBASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm25043-201ENSMUST00000158604 212 ntBASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm27516-201ENSMUST00000184237 98 ntBASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.56□□□□□ -0.56
Cdk9Q99J95 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdk9Q99J95 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm14832-201ENSMUST00000121289 322 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Mospd4-201ENSMUST00000180618 576 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm2546-201ENSMUST00000182630 991 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Mir8109-201ENSMUST00000184375 117 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm18893-201ENSMUST00000198416 943 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm10608-202ENSMUST00000213924 676 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm9368-201ENSMUST00000219348 831 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Lect2-202ENSMUST00000225183 823 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms