Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm25076-201ENSMUST00000104098 132 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm13549-201ENSMUST00000118339 796 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm11660-201ENSMUST00000120955 412 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm29410-201ENSMUST00000188383 694 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm37458-201ENSMUST00000194055 410 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm42779-201ENSMUST00000198807 406 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm18463-201ENSMUST00000207258 474 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm14942-201ENSMUST00000119642 336 ntBASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm15744-201ENSMUST00000161734 213 ntBASIC13.31□□□□□ -0.28
Smc1bQ920F6 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.31□□□□□ -0.28
Smc1bQ920F6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.31□□□□□ -0.28
Smc1bQ920F6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1bQ920F6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm22711-201ENSMUST00000116890 133 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms