Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm6867-201ENSMUST00000219165 425 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm18065-201ENSMUST00000221395 526 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdha3Q91Y16 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdha3Q91Y16 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm20426-201ENSMUST00000173657 440 ntBASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm38151-201ENSMUST00000195085 289 ntBASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm8959-201ENSMUST00000213150 571 ntBASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdha3Q91Y16 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Gm9540-201ENSMUST00000188230 478 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms