Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm24791-201ENSMUST00000104284 131 ntBASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm12218-201ENSMUST00000117666 399 ntBASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb5Q91XZ5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gm13445-201ENSMUST00000121664 307 ntBASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb5Q91XZ5 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Mir1905-201ENSMUST00000122779 82 ntBASIC13.49□□□□□ -0.25
Pcdhb5Q91XZ5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms