Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb6Q91XZ4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Olfml3-204ENSMUST00000169286 874 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Gm10774-201ENSMUST00000188689 204 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Gm8342-201ENSMUST00000209839 757 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Gm19208-201ENSMUST00000213861 912 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Ginm1-202ENSMUST00000065124 300 ntBASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb6Q91XZ4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb6Q91XZ4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm4294-201ENSMUST00000105169 614 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm15549-201ENSMUST00000121595 622 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm7666-201ENSMUST00000146631 819 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm5996-201ENSMUST00000211110 718 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Olfr584-201ENSMUST00000098210 964 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms