Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb17Q91VD8 Nlrp9b-202ENSMUST00000117909 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm14762-201ENSMUST00000105109 1771 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm6963-201ENSMUST00000147879 379 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm17376-201ENSMUST00000166016 84 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm43595-201ENSMUST00000196464 1071 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm19187-201ENSMUST00000206781 892 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 AC153152.2-201ENSMUST00000223165 959 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb17Q91VD8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm11990-201ENSMUST00000121505 897 ntBASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm27468-201ENSMUST00000183577 106 ntBASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm4034-201ENSMUST00000187674 480 ntBASIC12.71□□□□□ -0.37
Pcdhb17Q91VD8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms