Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Gm9823-201ENSMUST00000051212 327 ntBASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh18Q8VHR0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm15370-201ENSMUST00000117158 253 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm24845-201ENSMUST00000158034 109 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm807-202ENSMUST00000224929 408 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm10478-201ENSMUST00000084451 396 ntBASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh18Q8VHR0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Spata33-207ENSMUST00000212760 4074 ntBASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gm13297-201ENSMUST00000120205 934 ntBASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms