Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.86□□□□□ -0.51
Rprd1aQ8VDS4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm22711-201ENSMUST00000116890 133 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm14071-201ENSMUST00000117817 509 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12616-201ENSMUST00000118594 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm11836-201ENSMUST00000121022 441 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm18367-201ENSMUST00000176139 600 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12624-201ENSMUST00000177615 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12621-201ENSMUST00000177760 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12615-201ENSMUST00000177970 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12622-201ENSMUST00000177975 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12627-201ENSMUST00000178412 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12625-201ENSMUST00000179122 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12614-201ENSMUST00000179586 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm12613-201ENSMUST00000180323 382 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm4654-201ENSMUST00000183305 982 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm43186-201ENSMUST00000198130 824 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.85□□□□□ -0.51
Rprd1aQ8VDS4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm15881-201ENSMUST00000148792 942 ntBASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm23045-201ENSMUST00000175041 96 ntBASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm43916-201ENSMUST00000205062 967 ntBASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rprd1aQ8VDS4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rprd1aQ8VDS4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms