Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim29Q8R2Q0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm5733-201ENSMUST00000190232 939 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm18753-201ENSMUST00000201000 566 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm44008-201ENSMUST00000204345 412 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm19208-201ENSMUST00000213861 912 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim29Q8R2Q0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gm7857-201ENSMUST00000117957 358 ntBASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim29Q8R2Q0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim29Q8R2Q0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms