Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 n-R5s71-201ENSMUST00000093668 119 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm42748-201ENSMUST00000199354 2341 ntBASIC15□□□□□ -0.01
Ddx54Q8K4L0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx54Q8K4L0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm5976-201ENSMUST00000180794 996 ntBASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm2474-201ENSMUST00000195162 559 ntBASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 AC134913.2-201ENSMUST00000225017 771 ntBASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx54Q8K4L0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Mir1249-201ENSMUST00000116791 98 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm11960-201ENSMUST00000122068 925 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm5808-201ENSMUST00000178090 357 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm29543-201ENSMUST00000188138 967 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm5650-201ENSMUST00000209641 598 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx54Q8K4L0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx54Q8K4L0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms