Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
ShfQ8CG80 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
ShfQ8CG80 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
ShfQ8CG80 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm8566-201ENSMUST00000120174 465 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm26361-201ENSMUST00000158868 186 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm28686-201ENSMUST00000187404 609 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm3332-201ENSMUST00000189337 928 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm37666-201ENSMUST00000194110 866 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm44967-201ENSMUST00000207047 631 ntBASIC10.22□□□□□ -0.77
ShfQ8CG80 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
ShfQ8CG80 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ShfQ8CG80 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
ShfQ8CG80 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
ShfQ8CG80 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.21□□□□□ -0.77
ShfQ8CG80 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm23596-201ENSMUST00000104304 132 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm22846-201ENSMUST00000157706 270 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm16505-201ENSMUST00000179981 232 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm6867-201ENSMUST00000219165 425 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.21□□□□□ -0.77
ShfQ8CG80 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ShfQ8CG80 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.21□□□□□ -0.78
ShfQ8CG80 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ShfQ8CG80 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ShfQ8CG80 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
ShfQ8CG80 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms