Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm13611-201ENSMUST00000118269 318 ntBASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Gm11244-201ENSMUST00000121243 237 ntBASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Gm18827-201ENSMUST00000188341 790 ntBASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Gm43378-201ENSMUST00000199336 582 ntBASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Gm44100-201ENSMUST00000204329 436 ntBASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.83□□□□□ -0.2
Brf1Q8CFK2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Btrc-209ENSMUST00000224478 2194 ntBASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm7741-201ENSMUST00000181445 989 ntBASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm4654-201ENSMUST00000183305 982 ntBASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf1Q8CFK2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm15374-201ENSMUST00000119313 844 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Mir8115-201ENSMUST00000184992 119 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm43138-201ENSMUST00000199123 708 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Brf1Q8CFK2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms