Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm15617-201ENSMUST00000118973 771 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Olfml3-204ENSMUST00000169286 874 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm9353-201ENSMUST00000200472 604 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Olfr584-201ENSMUST00000098210 964 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim9Q8C7M3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm13045-201ENSMUST00000119019 712 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm7666-201ENSMUST00000146631 819 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim9Q8C7M3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms