Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm15824-201ENSMUST00000119516 955 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm15610-201ENSMUST00000120584 195 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm24845-201ENSMUST00000158034 109 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm8602-201ENSMUST00000184045 607 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm42710-201ENSMUST00000200608 985 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm42964-201ENSMUST00000202965 382 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Lect2-202ENSMUST00000225183 823 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm11Q8BUV6 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm11Q8BUV6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm11439-201ENSMUST00000118598 409 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm14832-201ENSMUST00000121289 322 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm25043-201ENSMUST00000158604 212 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm28011-201ENSMUST00000184097 175 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm28064-201ENSMUST00000185639 858 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm42627-201ENSMUST00000197347 224 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm43596-201ENSMUST00000202818 884 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm45258-201ENSMUST00000210042 853 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm11Q8BUV6 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms