Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm12857-201ENSMUST00000117678 592 ntBASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Gm37246-201ENSMUST00000192665 835 ntBASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4Q8BQZ5 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm7851-201ENSMUST00000117574 323 ntBASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm12501-201ENSMUST00000119163 529 ntBASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gm8420-201ENSMUST00000097103 598 ntBASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4Q8BQZ5 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm23251-201ENSMUST00000103773 110 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm11331-201ENSMUST00000119764 288 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm8566-201ENSMUST00000120174 465 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms