Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm11660-201ENSMUST00000120955 412 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm25890-201ENSMUST00000177643 165 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm25700-201ENSMUST00000177693 110 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm22614-201ENSMUST00000178300 165 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm27530-201ENSMUST00000184096 98 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Mir8093-201ENSMUST00000185043 137 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm6439-201ENSMUST00000199849 862 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm44651-201ENSMUST00000207343 372 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm22042-201ENSMUST00000082989 165 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm26110-201ENSMUST00000083971 165 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf38Q8BI21 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm26083-201ENSMUST00000157904 193 ntBASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm44967-201ENSMUST00000207047 631 ntBASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf38Q8BI21 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms