Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm9507-202ENSMUST00000180157 654 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm45527-201ENSMUST00000211052 774 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm18515-201ENSMUST00000219755 797 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm26226-201ENSMUST00000082509 116 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm23680-201ENSMUST00000083162 164 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Gm22146-201ENSMUST00000157397 288 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Mir8115-201ENSMUST00000184992 119 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Prpf38bQ80SY5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prpf38bQ80SY5 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Prpf38bQ80SY5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Prpf38bQ80SY5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prpf38bQ80SY5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Prpf38bQ80SY5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms