Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm23745-201ENSMUST00000104230 125 ntBASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm15136-201ENSMUST00000120552 533 ntBASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 BC080696-201ENSMUST00000202858 1218 ntBASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm11475-201ENSMUST00000118482 476 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm13204-201ENSMUST00000120110 821 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm25569-201ENSMUST00000157175 131 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm24954-201ENSMUST00000178831 110 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gm43854-201ENSMUST00000200418 394 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx55Q6ZPL9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Paupar-201ENSMUST00000194826 3482 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Mir432-201ENSMUST00000157230 75 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm11942-201ENSMUST00000180255 345 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm20781-201ENSMUST00000193154 693 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm21736-201ENSMUST00000195399 693 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm37197-201ENSMUST00000195607 401 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms