Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm11930-201ENSMUST00000117788 190 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm11425-201ENSMUST00000119608 498 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm11424-201ENSMUST00000121929 829 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm44008-201ENSMUST00000204345 412 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm9823-201ENSMUST00000051212 327 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm9396-201ENSMUST00000076703 567 ntBASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scaf4Q6PFF0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Gm8885-201ENSMUST00000189382 598 ntBASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Gm7940-201ENSMUST00000218195 769 ntBASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms